Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | SAMEA3752372_01941 | Not Available | Positive | 1913246 - 1914280 | 37603.4 |
| nad(p) transhydrogenase subunit beta | SAMEA3752372_01942 | Not Available | Negative | 1914305 - 1915693 | 48726.0 |
| nad(p) transhydrogenase subunit alpha | SAMEA3752372_01943 | Not Available | Negative | 1915704 - 1917236 | 54626.6 |
| protein ydgh | SAMEA3752372_01944 | Not Available | Positive | 1917760 - 1918704 | 33905.0 |
| arginine/ornithine antiporter | SAMEA3752372_01945 | Not Available | Positive | 1918890 - 1920272 | 49518.5 |
| putative short chain dehydrogenase | SAMEA3752372_01946 | Not Available | Positive | 1920309 - 1921031 | 26407.9 |
| inner membrane protein associated with alginate biosynthesis | SAMEA3752372_01947 | Not Available | Negative | 1921028 - 1921363 | 12295.8 |
| dna-binding transcriptional regulator rsta | SAMEA3752372_01948 | Not Available | Positive | 1921492 - 1922211 | 26691.3 |
| two component sensor kinase | SAMEA3752372_01949 | Not Available | Positive | 1922215 - 1922412 | 7644.73 |
| two component sensor kinase | SAMEA3752372_01950 | Not Available | Positive | 1922418 - 1923515 | 41258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





