Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase) | SAMEA3752372_01665 | Not Available | Positive | 1652400 - 1653179 | 27799.4 |
| glucitol operon activator protein | SAMEA3752372_01666 | Not Available | Positive | 1653285 - 1653644 | 12980.1 |
| glucitol operon repressor | SAMEA3752372_01667 | Not Available | Positive | 1653711 - 1654484 | 28236.8 |
| d-arabinose 5-phosphate isomerase | SAMEA3752372_01668 | Not Available | Positive | 1654477 - 1655442 | 34033.6 |
| putative two-component transcriptional regulator | SAMEA3752372_01669 | Not Available | Negative | 1655439 - 1656953 | 55162.5 |
| anaerobic nitric oxide reductase flavorubredoxin | SAMEA3752372_01670 | Not Available | Positive | 1657140 - 1658579 | 54224.0 |
| nitric oxide reductase flrd-nad(+) reductase | SAMEA3752372_01671 | Not Available | Positive | 1658576 - 1659709 | 41439.2 |
| hydrogenase maturation protein hypf | SAMEA3752372_01672 | Not Available | Negative | 1659787 - 1662027 | 81449.0 |
| electron transport protein hydn | SAMEA3752372_01673 | Not Available | Negative | 1662180 - 1662707 | 19027.2 |
| transcriptional regulator | SAMEA3752372_01674 | Not Available | Negative | 1662856 - 1663869 | 36907.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





