Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation inhibitor protein raia | SAMEA3752372_01523 | Not Available | Positive | 1533127 - 1533468 | 12785.3 |
| abc transporter atp-binding protein | SAMEA3752372_01613 | Not Available | Negative | 1602065 - 1606639 | 157634.0 |
| uncharacterised protein | SAMEA3752372_01614 | Not Available | Negative | 1607575 - 1609029 | 54992.9 |
| Trna-met | Not Available | Not Available | Positive | 1609786 - 1609861 | Not Available |
| alpha-amylase | SAMEA3752372_01616 | Not Available | Positive | 1610421 - 1612673 | 85028.0 |
| protein csid | SAMEA3752372_01617 | Not Available | Positive | 1613010 - 1613987 | 37324.6 |
| hydroxyglutarate oxidase | SAMEA3752372_01618 | Not Available | Positive | 1614007 - 1615275 | 46127.7 |
| succinate-semialdehyde dehydrogenase | SAMEA3752372_01619 | Not Available | Positive | 1615298 - 1616746 | 51778.1 |
| 4-aminobutyrate aminotransferase | SAMEA3752372_01620 | Not Available | Positive | 1616760 - 1618040 | 45651.2 |
| gamma-aminobutyrate transporter | SAMEA3752372_01621 | Not Available | Positive | 1618278 - 1619678 | 51083.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





