Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase associated protein | SAMEA3752372_01492 | Not Available | Negative | 1499909 - 1500163 | 8703.27 |
| protein involved in flagellar function | SAMEA3752372_01493 | Not Available | Positive | 1500364 - 1501098 | 27826.7 |
| membrane-bound lytic murein transglycosylase e | SAMEA3752372_01494 | Not Available | Negative | 1501100 - 1501711 | 22213.7 |
| muramoyltetrapeptide carboxypeptidase | SAMEA3752372_01495 | Not Available | Positive | 1501811 - 1502725 | 33536.4 |
| cell volume regulation protein a | SAMEA3752372_01496 | Not Available | Positive | 1502820 - 1504556 | 62257.2 |
| putative type iii effector protein (leucine-rich repeat protein) | SAMEA3752372_01497 | Not Available | Positive | 1505047 - 1506483 | 55217.0 |
| alanine racemase, catabolic | SAMEA3752372_01498 | Not Available | Negative | 1506651 - 1507721 | 38915.0 |
| d-amino acid dehydrogenase small subunit | SAMEA3752372_01499 | Not Available | Negative | 1507731 - 1509029 | 47610.1 |
| spovr family protein | SAMEA3752372_01500 | Not Available | Positive | 1509359 - 1510891 | 60803.1 |
| fatty acid metabolism regulator protein | SAMEA3752372_01501 | Not Available | Negative | 1510941 - 1511660 | 26970.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





