Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysb | SAMEA3752372_01396 | Not Available | Negative | 1405382 - 1406356 | 36152.5 |
| dna topoisomerase i | SAMEA3752372_01397 | Not Available | Negative | 1406567 - 1409164 | 97356.0 |
| protein | SAMEA3752372_01398 | Not Available | Positive | 1409544 - 1409795 | 9386.17 |
| protease | SAMEA3752372_01399 | Not Available | Negative | 1409831 - 1410880 | 39344.7 |
| putative short chain dehydrogenase | SAMEA3752372_01400 | Not Available | Positive | 1411100 - 1411858 | 27935.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3752372_01401 | Not Available | Positive | 1411855 - 1412445 | 22038.2 |
| uncharacterised protein | SAMEA3752372_01402 | Not Available | Negative | 1412502 - 1412810 | 11633.0 |
| putative lipoprotein | SAMEA3752372_01403 | Not Available | Negative | 1412820 - 1413842 | 38047.4 |
| 23s rrna pseudouridylate synthase b | SAMEA3752372_01404 | Not Available | Negative | 1414012 - 1414887 | 32727.4 |
| putative inner membrane protein | SAMEA3752372_01405 | Not Available | Negative | 1415098 - 1416993 | 71438.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





