Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase | SAMEA3752372_01344 | Not Available | Negative | 1351843 - 1353444 | 60265.9 |
| homoserine o-succinyltransferase | SAMEA3752372_01345 | Not Available | Negative | 1353713 - 1354642 | 35759.2 |
| putative acetyltransferase | SAMEA3752372_01346 | Not Available | Positive | 1354799 - 1355242 | 16639.0 |
| putative nad(p) binding enzyme | SAMEA3752372_01348 | Not Available | Positive | 1355764 - 1356213 | 16396.5 |
| putative carboxypeptidase | SAMEA3752372_01349 | Not Available | Positive | 1356504 - 1357232 | 26564.4 |
| putative mandelate racemase/muconate lactonizing family protein | SAMEA3752372_01350 | Not Available | Negative | 1357207 - 1358172 | 34561.9 |
| thiol peroxidase | SAMEA3752372_01351 | Not Available | Positive | 1358291 - 1358797 | 17836.3 |
| dna-binding transcriptional regulator tyrr | SAMEA3752372_01352 | Not Available | Negative | 1358841 - 1360382 | 57627.5 |
| putative inner membrane protein | SAMEA3752372_01353 | Not Available | Negative | 1360530 - 1361591 | 39376.4 |
| putative atp-binding protein | SAMEA3752372_01354 | Not Available | Negative | 1361588 - 1362985 | 52570.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





