Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbose-specific pts system eiic component | SAMEA3752372_01334 | Not Available | Positive | 1335618 - 1336415 | 28038.1 |
| pts system, mannose-specific iid component | SAMEA3752372_01335 | Not Available | Positive | 1336426 - 1337250 | 29513.9 |
| putative l-sorbose 1-phosphate reductase | SAMEA3752372_01336 | Not Available | Positive | 1337302 - 1338531 | 44731.2 |
| peptidase e | SAMEA3752372_01337 | Not Available | Positive | 1338914 - 1339603 | 24571.7 |
| putative transporter | SAMEA3752372_01338 | Not Available | Negative | 1339693 - 1341324 | 59470.7 |
| b12-dependent methionine synthase | SAMEA3752372_01339 | Not Available | Negative | 1341544 - 1345227 | 135979.0 |
| iclr family transcriptional regulator | SAMEA3752372_01340 | Not Available | Positive | 1345427 - 1346251 | 29741.1 |
| putative type iii effector protein (ankyrin repeat protein a) | SAMEA3752372_01341 | Not Available | Positive | 1346569 - 1348755 | 82549.8 |
| isocitrate dehydrogenase kinase/phosphatase | SAMEA3752372_01342 | Not Available | Negative | 1348724 - 1350460 | 67604.2 |
| isocitrate lyase | SAMEA3752372_01343 | Not Available | Negative | 1350509 - 1351813 | 47524.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





