Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate transporter | SAMEA3752372_01200 | Not Available | Negative | 1194213 - 1194782 | 21706.8 |
| putative phage-related regulatory protein | SAMEA3752372_01201 | Not Available | Positive | 1196410 - 1196616 | 7800.53 |
| uncharacterised protein | SAMEA3752372_01202 | Not Available | Positive | 1196710 - 1197312 | 23666.5 |
| phage-associated protein | SAMEA3752372_01203 | Not Available | Positive | 1198752 - 1199774 | 39981.9 |
| putative gtp-binding protein | SAMEA3752372_01204 | Not Available | Positive | 1199858 - 1200730 | 32464.8 |
| putative antigen 43 precursor (fluffing protein) | SAMEA3752372_01206 | Not Available | Positive | 1201102 - 1203948 | 97338.7 |
| putative plasmid-like protein | SAMEA3752372_01207 | Not Available | Positive | 1204019 - 1204252 | 8745.42 |
| transcriptional activator | SAMEA3752372_01216 | Not Available | Positive | 1209544 - 1211082 | 57818.1 |
| cadaverine/lysine antiporter | SAMEA3752372_01217 | Not Available | Positive | 1211448 - 1212782 | 46667.8 |
| lysine decarboxylase 1 | SAMEA3752372_01218 | Not Available | Positive | 1212862 - 1215009 | 81264.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





