Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-4 subunit g | SAMEA3752372_01071 | Not Available | Positive | 1044041 - 1045756 | 65037.1 |
| hydrogenase-4 component h | SAMEA3752372_01072 | Not Available | Positive | 1045766 - 1046311 | 20188.5 |
| hydrogenase-4 subunit i | SAMEA3752372_01073 | Not Available | Positive | 1046308 - 1047066 | 28060.9 |
| protein processing element | SAMEA3752372_01074 | Not Available | Positive | 1047059 - 1047472 | 15662.8 |
| 2-component regulator | SAMEA3752372_01075 | Not Available | Positive | 1047502 - 1049514 | 75310.7 |
| formate transporter focb | SAMEA3752372_01076 | Not Available | Positive | 1049536 - 1050384 | 30542.3 |
| putative permease | SAMEA3752372_01077 | Not Available | Negative | 1050422 - 1051483 | 39210.9 |
| putative peptidase | SAMEA3752372_01078 | Not Available | Positive | 1051696 - 1053159 | 53911.1 |
| putative glutaredoxin | SAMEA3752372_01079 | Not Available | Positive | 1053180 - 1053539 | 13417.4 |
| dnaa family protein hda | SAMEA3752372_01080 | Not Available | Negative | 1053677 - 1054423 | 28371.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





