Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, permease protein | SAMEA3752372_01010 | Not Available | Positive | 978687 - 979520 | 30363.8 |
| nickel abc transporter, atp-binding protein | SAMEA3752372_01011 | Not Available | Positive | 979520 - 980284 | 26814.2 |
| nickel abc transporter, atp-binding protein | SAMEA3752372_01012 | Not Available | Positive | 980281 - 981087 | 29771.5 |
| nickel responsive regulator | SAMEA3752372_01013 | Not Available | Positive | 981093 - 981494 | 15094.7 |
| hicb family protein | SAMEA3752372_01014 | Not Available | Negative | 981614 - 981973 | 13403.0 |
| hica-like protein | SAMEA3752372_01015 | Not Available | Negative | 981970 - 982245 | 10186.4 |
| putative transporter subunit: membrane component of abc superfamily | SAMEA3752372_01016 | Not Available | Negative | 982318 - 983442 | 41050.2 |
| putative type i secretion system, atp-binding protein | SAMEA3752372_01017 | Not Available | Negative | 983442 - 986177 | 100807.0 |
| putative type i secretion system, inner membrane protein | SAMEA3752372_01018 | Not Available | Negative | 986174 - 987241 | 38830.6 |
| protein | SAMEA3752372_01019 | Not Available | Negative | 987607 - 989229 | 61254.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





