Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phage dna packaging protein | SAMEA3752372_00318 | Not Available | Positive | 316764 - 317330 | 21831.7 |
| Dna packaging protein | SAMEA3752372_00319 | Not Available | Positive | 317299 - 319179 | 70511.9 |
| Bacteriophage head-to-tail joining protein | SAMEA3752372_00320 | Not Available | Positive | 319179 - 319412 | 8586.33 |
| Capsid component | SAMEA3752372_00321 | Not Available | Positive | 319409 - 320983 | 58332.5 |
| Capsid component | SAMEA3752372_00322 | Not Available | Positive | 320983 - 322290 | 45952.5 |
| Head decoration protein | SAMEA3752372_00323 | Not Available | Positive | 322290 - 322619 | 11374.4 |
| Capsid component | SAMEA3752372_00324 | Not Available | Positive | 322679 - 323713 | 38528.6 |
| Dna packaging protein fi | SAMEA3752372_00325 | Not Available | Positive | 323748 - 324161 | 14719.9 |
| uncharacterised protein | SAMEA3752372_00326 | Not Available | Positive | 324158 - 324538 | 13994.3 |
| Putative minor tail protein z | SAMEA3752372_00327 | Not Available | Positive | 324569 - 325249 | 25582.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





