Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3752372_00725 | Not Available | Positive | 711993 - 713051 | 39957.7 |
| putative alpha helix protein | SAMEA3752372_00726 | Not Available | Positive | 713223 - 713552 | 12778.5 |
| bifunctional adenosylcobalamin biosynthesis protein | SAMEA3752372_00727 | Not Available | Positive | 714424 - 714966 | 20011.1 |
| cobalamin synthase | SAMEA3752372_00728 | Not Available | Positive | 714963 - 715706 | 26397.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3752372_00729 | Not Available | Positive | 715718 - 716797 | 37003.4 |
| erfk/ybis/ycfs/ynhg family protein | SAMEA3752372_00730 | Not Available | Positive | 716859 - 717794 | 34551.4 |
| Trna-asn | Not Available | Not Available | Positive | 717850 - 717925 | Not Available |
| nitrogen assimilation regulatory protein nac | SAMEA3752372_00732 | Not Available | Positive | 718251 - 719168 | 32841.0 |
| lysr family transcriptional regulator | SAMEA3752372_00733 | Not Available | Positive | 719342 - 720220 | 33054.7 |
| Trna-asn | Not Available | Not Available | Positive | 720258 - 720333 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





