Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | SAMEA3752372_00713 | Not Available | Negative | 701492 - 702391 | 33368.8 |
| antitoxin yefm | SAMEA3752372_00715 | Not Available | Positive | 702870 - 703121 | 9332.2 |
| protein yeez | SAMEA3752372_00716 | Not Available | Positive | 703456 - 704280 | 29681.7 |
| lysr family transcriptional regulator | SAMEA3752372_00717 | Not Available | Positive | 704305 - 705255 | 34902.0 |
| putative amino acid permease | SAMEA3752372_00719 | Not Available | Positive | 705522 - 706880 | 49457.4 |
| inner membrane protein | SAMEA3752372_00720 | Not Available | Positive | 707113 - 708117 | 36218.2 |
| sira family protein | SAMEA3752372_00721 | Not Available | Positive | 708131 - 708358 | 8092.61 |
| exodeoxyribonuclease i | SAMEA3752372_00722 | Not Available | Negative | 708401 - 709828 | 54415.6 |
| penicillin-binding protein 6b | SAMEA3752372_00723 | Not Available | Positive | 710037 - 711203 | 43348.5 |
| dna gyrase inhibitory protein | SAMEA3752372_00724 | Not Available | Positive | 711322 - 711795 | 18062.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





