Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | SAMEA3752372_00693 | Not Available | Positive | 680660 - 681559 | 32618.8 |
| glucose-1-phosphate thymidylyltransferase | SAMEA3752372_00694 | Not Available | Positive | 681617 - 682495 | 32482.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase rfbc | SAMEA3752372_00695 | Not Available | Positive | 682500 - 683036 | 20450.4 |
| polysaccharide biosynthesis protein | SAMEA3752372_00696 | Not Available | Positive | 683495 - 684424 | 34972.3 |
| putative glycosyl transferase family protein | SAMEA3752372_00697 | Not Available | Positive | 684426 - 685370 | 35838.6 |
| group 1 glycosyl transferase | SAMEA3752372_00698 | Not Available | Positive | 685363 - 686439 | 41539.9 |
| vi polysaccharide biosynthesis protein vipa/tvib | SAMEA3752372_00699 | Not Available | Positive | 686500 - 687777 | 46908.5 |
| vi polysaccharide biosynthesis protein vipb/tvic | SAMEA3752372_00700 | Not Available | Positive | 687779 - 688804 | 38097.3 |
| putative glycosyl transferase | SAMEA3752372_00701 | Not Available | Positive | 688848 - 689978 | 42242.3 |
| lipid a core - o-antigen ligase and related enzymes | SAMEA3752372_00702 | Not Available | Positive | 689983 - 691194 | 46190.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





