Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | SAMEA3752372_00604 | Not Available | Positive | 579805 - 581490 | 62096.3 |
| two-component response-regulatory protein yeht | SAMEA3752372_00605 | Not Available | Positive | 581487 - 582206 | 27401.4 |
| conserved protein, duf1456 family | SAMEA3752372_00606 | Not Available | Positive | 582253 - 582723 | 18003.9 |
| lipoprotein yehr | SAMEA3752372_00607 | Not Available | Negative | 582764 - 583225 | 16595.0 |
| zinc finger swim domain-containing protein | SAMEA3752372_00608 | Not Available | Negative | 583350 - 585350 | 73687.1 |
| von willebrand factor type a domain protein yehp | SAMEA3752372_00609 | Not Available | Negative | 585347 - 586483 | 42274.7 |
| protein | SAMEA3752372_00610 | Not Available | Negative | 586476 - 588755 | 83482.8 |
| atpase | SAMEA3752372_00611 | Not Available | Negative | 588766 - 589854 | 39735.7 |
| uncharacterised protein | SAMEA3752372_00613 | Not Available | Positive | 590287 - 590376 | 3263.34 |
| protein | SAMEA3752372_00615 | Not Available | Negative | 590770 - 591087 | 12676.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





