Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | SAMEA3472114_00014 | Not Available | Positive | 6836 - 7381 | 20442.2 |
| Dna packaging protein | SAMEA3472114_00015 | Not Available | Positive | 7356 - 9281 | 73305.5 |
| Head-tail joining protein | SAMEA3472114_00016 | Not Available | Positive | 9278 - 9484 | 7613.19 |
| Capsid component | SAMEA3472114_00017 | Not Available | Positive | 9481 - 11082 | 59422.9 |
| Capsid component | SAMEA3472114_00018 | Not Available | Positive | 11063 - 12382 | 45958.5 |
| Head-dna stabilization protein | SAMEA3472114_00019 | Not Available | Positive | 12392 - 12724 | 11571.5 |
| Trna-ser; | Not Available | Not Available | Positive | 12567 - 12654 | Not Available |
| Capsid component | SAMEA3472114_00020 | Not Available | Positive | 12780 - 13805 | 38137.4 |
| Dna packaging protein | SAMEA3472114_00021 | Not Available | Positive | 13847 - 14242 | 13975.4 |
| Head-tail joining protein | SAMEA3472114_00022 | Not Available | Positive | 14254 - 14607 | 12779.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





