Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472114_01424 | Not Available | Positive | 1522396 - 1522617 | 8409.23 |
| Hypothetical protein | SAMEA3472114_01425 | Not Available | Positive | 1522636 - 1523283 | 25137.2 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472114_01426 | Not Available | Positive | 1523333 - 1523701 | 13800.4 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472114_01427 | Not Available | Positive | 1523790 - 1524167 | 13910.7 |
| aec77 | SAMEA3472114_01428 | Not Available | Positive | 1524164 - 1524652 | 18104.6 |
| aec78 | SAMEA3472114_01429 | Not Available | Positive | 1524664 - 1524861 | 7453.75 |
| Putative methylase | SAMEA3472114_01430 | Not Available | Positive | 1524946 - 1525788 | 32456.9 |
| Trna,type:ser,anti_codon:gga; | Not Available | Not Available | Positive | 1525938 - 1526025 | Not Available |
| translation initiation factor if-1 | SAMEA3472114_01432 | Not Available | Negative | 1526279 - 1526497 | 8250.1 |
| leucyl/phenylalanyl-trna-protein transferase | SAMEA3472114_01433 | Not Available | Negative | 1526782 - 1527486 | 26620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





