Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation protein rimp | SAMEA3472114_00482 | Not Available | Positive | 502873 - 503325 | 16651.9 |
| transcription termination/antitermination factor nusa | SAMEA3472114_00483 | Not Available | Positive | 503353 - 504840 | 54874.0 |
| translation initiation factor if2-alpha | SAMEA3472114_00484 | Not Available | Positive | 504865 - 507537 | 97355.5 |
| ribosome-binding factor a | SAMEA3472114_00485 | Not Available | Positive | 507701 - 508102 | 15155.4 |
| trna pseudouridine synthase b | SAMEA3472114_00486 | Not Available | Positive | 508102 - 509046 | 35089.2 |
| polynucleotide phosphorylase | SAMEA3472114_00489 | Not Available | Positive | 509711 - 511846 | 77106.6 |
| lipoprotein nlpi precursor | SAMEA3472114_00490 | Not Available | Positive | 511955 - 512839 | 33622.5 |
| atp-dependent rna helicase (dead-box protein) | SAMEA3472114_00491 | Not Available | Positive | 513019 - 514908 | 70550.5 |
| tryptophan-specific transport protein | SAMEA3472114_00492 | Not Available | Positive | 515062 - 516306 | 44379.2 |
| monooxygenase | SAMEA3472114_00493 | Not Available | Negative | 516424 - 517431 | 37092.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





