Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | SAMEA3472114_00419 | Not Available | Positive | 443639 - 444577 | 32339.2 |
| protease | SAMEA3472114_00420 | Not Available | Negative | 444639 - 445706 | 37583.4 |
| serine endoprotease | SAMEA3472114_00421 | Not Available | Negative | 445796 - 447163 | 47207.9 |
| cytochrome d ubiquinol oxidase subunit iii | SAMEA3472114_00422 | Not Available | Negative | 447317 - 447715 | 14961.7 |
| putative atp/gtp-binding protein | SAMEA3472114_00423 | Not Available | Positive | 447909 - 449036 | 43075.1 |
| 50s ribosomal protein l13 | SAMEA3472114_00424 | Not Available | Positive | 449255 - 449683 | 16019.5 |
| 30s ribosomal protein s9 | SAMEA3472114_00425 | Not Available | Positive | 449699 - 450091 | 14857.1 |
| stringent starvation protein a | SAMEA3472114_00426 | Not Available | Positive | 450486 - 451124 | 24306.3 |
| stringent starvation protein b | SAMEA3472114_00427 | Not Available | Positive | 451130 - 451627 | 18263.4 |
| c4-dicarboxylate transporter | SAMEA3472114_00428 | Not Available | Negative | 451670 - 453037 | 48850.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





