Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin | SAMEA3472114_00336 | Not Available | Negative | 340681 - 340971 | 10782.7 |
| inner membrane protein | SAMEA3472114_00337 | Not Available | Negative | 341230 - 342054 | 29478.7 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | SAMEA3472114_00339 | Not Available | Positive | 345403 - 346287 | 32240.4 |
| formate dehydrogenase-n subunit gamma | SAMEA3472114_00340 | Not Available | Positive | 346280 - 346933 | 25370.0 |
| putative plasmid maintenance protein | SAMEA3472114_00341 | Not Available | Negative | 347162 - 347446 | 10401.7 |
| alcohol dehydrogenase | SAMEA3472114_00342 | Not Available | Negative | 347592 - 348602 | 35398.6 |
| malate dehydrogenase | SAMEA3472114_00343 | Not Available | Negative | 348736 - 350433 | 63167.0 |
| 30s ribosomal subunit s22 | SAMEA3472114_00344 | Not Available | Negative | 350590 - 350727 | 5096.13 |
| biofilm-dependent modulation protein | SAMEA3472114_00345 | Not Available | Negative | 350829 - 351044 | 7987.26 |
| peroxiredoxin (osmotically-inducible protein c) | SAMEA3472114_00346 | Not Available | Positive | 351389 - 351820 | 15028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





