Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | SAMEA3472114_00120 | Not Available | Negative | 111379 - 112221 | 31922.6 |
| sec-c motif domain-containing protein | SAMEA3472114_00121 | Not Available | Negative | 112271 - 112729 | 16991.2 |
| patatin | SAMEA3472114_00122 | Not Available | Positive | 112803 - 113747 | 34329.6 |
| orphan two-component response regulator | SAMEA3472114_00123 | Not Available | Positive | 113839 - 114852 | 37304.5 |
| utp--glucose-1-phosphate uridylyltransferase | SAMEA3472114_00124 | Not Available | Positive | 115054 - 115962 | 32944.2 |
| h-ns histone family protein | SAMEA3472114_00125 | Not Available | Negative | 116106 - 116519 | 15540.5 |
| thymidine kinase | SAMEA3472114_00126 | Not Available | Positive | 117123 - 117740 | 23355.8 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | SAMEA3472114_00127 | Not Available | Negative | 118042 - 120717 | 96132.5 |
| marc family integral membrane protein | SAMEA3472114_00128 | Not Available | Positive | 121194 - 121841 | 23522.7 |
| uncharacterised protein | SAMEA3472114_00129 | Not Available | Positive | 121868 - 121963 | 3696.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





