Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative plasmid-like protein | SAMEA3472114_05424 | Not Available | Negative | 5453823 - 5454056 | 8777.4 |
| uncharacterised protein | SAMEA3472114_05425 | Not Available | Negative | 5454135 - 5454590 | 16902.1 |
| membrane protein, yeer | SAMEA3472114_05426 | Not Available | Negative | 5454666 - 5456015 | 47645.6 |
| uncharacterised protein | SAMEA3472114_05427 | Not Available | Negative | 5456278 - 5456484 | 8195.2 |
| pi protein (replication initiation protein) | SAMEA3472114_05428 | Not Available | Negative | 5456524 - 5457360 | 32227.7 |
| putative antitoxin of toxin-antitoxin system | SAMEA3472114_05429 | Not Available | Positive | 5458594 - 5458845 | 9194.91 |
| toxin of the rele-relb toxin-antitoxin system | SAMEA3472114_05430 | Not Available | Positive | 5458835 - 5459116 | 11006.5 |
| domain of uncharacterised function (duf3560) | SAMEA3472114_05431 | Not Available | Positive | 5459564 - 5460925 | 52020.7 |
| adenine-specific dna methylase | SAMEA3472114_05432 | Not Available | Positive | 5460972 - 5461535 | 21065.7 |
| is91, orf2 | SAMEA3472114_05433 | Not Available | Positive | 5462336 - 5462701 | 13761.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





