Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly complex subunit yfio | SAMEA3472114_05403 | Not Available | Negative | 5430763 - 5431500 | 27830.9 |
| 23s rrna pseudouridine synthase | SAMEA3472114_05404 | Not Available | Positive | 5431635 - 5432615 | 37123.9 |
| putative inner membrane protein | SAMEA3472114_05405 | Not Available | Positive | 5432612 - 5433343 | 26299.3 |
| protein disaggregation chaperone | SAMEA3472114_05406 | Not Available | Positive | 5433473 - 5436046 | 95590.8 |
| putative antigen 43 precursor (fluffing protein) | SAMEA3472114_05407 | Not Available | Positive | 5436825 - 5439671 | 97357.5 |
| putative plasmid-like protein | SAMEA3472114_05408 | Not Available | Positive | 5439742 - 5439900 | 5915.98 |
| cp4-57 prophage protein | SAMEA3472114_05409 | Not Available | Positive | 5440055 - 5440873 | 31184.4 |
| antirestriction protein | SAMEA3472114_05410 | Not Available | Positive | 5441215 - 5441688 | 17831.1 |
| putative dna repair protein | SAMEA3472114_05411 | Not Available | Positive | 5441704 - 5442180 | 17731.5 |
| yifn | SAMEA3472114_05413 | Not Available | Negative | 5442748 - 5443221 | 17280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





