Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA3472114_05329 | Not Available | Positive | 5370681 - 5371607 | 35507.1 |
| putative transposase | SAMEA3472114_05330 | Not Available | Positive | 5371669 - 5371827 | 5929.19 |
| uncharacterised protein | SAMEA3472114_05331 | Not Available | Negative | 5371858 - 5372109 | 9909.82 |
| transposase | SAMEA3472114_05332 | Not Available | Negative | 5372159 - 5372344 | 6852.26 |
| putative colicin lysis protein | SAMEA3472114_05343 | Not Available | Negative | 5383785 - 5383922 | 4828.97 |
| colicin-e1 immunity protein | SAMEA3472114_05344 | Not Available | Positive | 5383970 - 5384311 | 13261.7 |
| colicin-e1 protein | SAMEA3472114_05345 | Not Available | Negative | 5384308 - 5385876 | 57238.9 |
| entry exclusion protein 1 | SAMEA3472114_05346 | Not Available | Positive | 5386136 - 5386573 | 17432.6 |
| putative lipoprotein | SAMEA3472114_05347 | Not Available | Positive | 5386654 - 5387073 | 15757.6 |
| mobilization protein moba | SAMEA3472114_05348 | Not Available | Negative | 5387284 - 5388837 | 57797.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





