Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membraneprotein | SAMEA3472114_05299 | Not Available | Negative | 5347480 - 5347938 | 17945.2 |
| uncharacterised protein | SAMEA3472114_05300 | Not Available | Positive | 5348396 - 5348905 | 19144.1 |
| putative dna-binding protein | SAMEA3472114_05301 | Not Available | Positive | 5348994 - 5349617 | 23983.9 |
| uncharacterised protein | SAMEA3472114_05302 | Not Available | Positive | 5349713 - 5349946 | 8876.17 |
| phage protein | SAMEA3472114_05303 | Not Available | Negative | 5349999 - 5350190 | 7385.81 |
| potra domain, shlb-type family | SAMEA3472114_05304 | Not Available | Positive | 5350865 - 5351911 | 37226.2 |
| putative uvrd/rep helicase-like protein | SAMEA3472114_05305 | Not Available | Positive | 5352152 - 5354833 | 102060.0 |
| putative phosphoadenosine phosphosulfate reductase | SAMEA3472114_05306 | Not Available | Positive | 5355334 - 5356566 | 48762.3 |
| parb-like nuclease | SAMEA3472114_05307 | Not Available | Positive | 5356551 - 5357189 | 24150.8 |
| putative spnt protein | SAMEA3472114_05308 | Not Available | Positive | 5357558 - 5358202 | 25423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





