Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss effector protein espx | SAMEA3472114_05247 | Not Available | Positive | 5308252 - 5309361 | 43397.6 |
| t3ss effector espx | SAMEA3472114_05248 | Not Available | Positive | 5309385 - 5309672 | 11285.8 |
| usher protein | SAMEA3472114_05249 | Not Available | Positive | 5310105 - 5310701 | 22889.7 |
| usher protein | SAMEA3472114_05250 | Not Available | Positive | 5310990 - 5311250 | 9878.74 |
| uncharacterised protein | SAMEA3472114_05251 | Not Available | Positive | 5311263 - 5311481 | 8100.2 |
| ybl1 | SAMEA3472114_05252 | Not Available | Positive | 5311442 - 5312221 | 29318.2 |
| transcriptional activator nhar | SAMEA3472114_05253 | Not Available | Negative | 5312260 - 5313159 | 34040.0 |
| na(+)/h(+) antiporter 1 | SAMEA3472114_05254 | Not Available | Negative | 5313225 - 5314391 | 41358.3 |
| dna methylase | SAMEA3472114_05256 | Not Available | Negative | 5315363 - 5316046 | 25400.3 |
| yfda | SAMEA3472114_05257 | Not Available | Negative | 5316429 - 5317355 | 34935.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





