Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein ychh | SAMEA3472114_00086 | Not Available | Positive | 83220 - 83498 | 10486.9 |
| sulfate transporter ychm | SAMEA3472114_00087 | Not Available | Negative | 83553 - 85205 | 58388.5 |
| ribose-phosphate pyrophosphokinase | SAMEA3472114_00088 | Not Available | Negative | 85357 - 86370 | 36651.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 86602 - 86694 | Not Available |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMEA3472114_00089 | Not Available | Negative | 86455 - 87306 | 30956.2 |
| outer membrane lipoprotein lolb | SAMEA3472114_00090 | Not Available | Negative | 87306 - 87929 | 23579.1 |
| glutamyl-trna reductase | SAMEA3472114_00091 | Not Available | Positive | 88074 - 89399 | 48883.8 |
| peptide chain release factor 1 | SAMEA3472114_00092 | Not Available | Positive | 89441 - 90523 | 40519.6 |
| protein methyltransferase hemk (protein-glutamine n methyltransferase) | SAMEA3472114_00093 | Not Available | Positive | 90523 - 91356 | 30989.8 |
| transcriptional regulator | SAMEA3472114_00094 | Not Available | Positive | 91353 - 91745 | 14657.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





