Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3472114_05187 | Not Available | Positive | 5242881 - 5243261 | 14056.0 |
| transposase | SAMEA3472114_05188 | Not Available | Positive | 5243258 - 5244790 | 56845.6 |
| uncharacterized protein conserved in bacteria | SAMEA3472114_05189 | Not Available | Negative | 5245029 - 5246387 | 49070.4 |
| biofilm development protein ymgb/arir | SAMEA3472114_05190 | Not Available | Negative | 5247120 - 5247377 | 9908.9 |
| uncharacterised protein | SAMEA3472114_05191 | Not Available | Positive | 5247501 - 5247611 | 4160.26 |
| is1 transposase | SAMEA3472114_05192 | Not Available | Negative | 5248139 - 5248348 | 8322.21 |
| is1 protein insb | SAMEA3472114_05193 | Not Available | Negative | 5248349 - 5248642 | 11273.6 |
| rna polymerase sigma factor | SAMEA3472114_05194 | Not Available | Positive | 5249128 - 5249649 | 19481.5 |
| iron(iii) dicitrate sensor protein | SAMEA3472114_05195 | Not Available | Positive | 5249646 - 5250599 | 35534.1 |
| iron(iii) dicitrate tonb-dependent receptor | SAMEA3472114_05196 | Not Available | Positive | 5250686 - 5250856 | 5953.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





