Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prophage protein | SAMEA3472114_05112 | Not Available | Negative | 5185999 - 5186409 | 15065.2 |
| uncharacterised protein | SAMEA3472114_05113 | Not Available | Negative | 5186503 - 5186616 | 4223.47 |
| uncharacterised protein | SAMEA3472114_05114 | Not Available | Negative | 5186613 - 5186855 | 8984.55 |
| uncharacterised protein | SAMEA3472114_05115 | Not Available | Negative | 5186866 - 5187153 | 10573.7 |
| uncharacterised protein | SAMEA3472114_05116 | Not Available | Negative | 5187164 - 5187505 | 12844.1 |
| regulatory phage protein cox | SAMEA3472114_05117 | Not Available | Negative | 5187524 - 5187850 | 12674.4 |
| immunity repressor | SAMEA3472114_05118 | Not Available | Positive | 5187945 - 5188247 | 11297.8 |
| integrase | SAMEA3472114_05119 | Not Available | Positive | 5188314 - 5189303 | 37246.4 |
| p-protein | SAMEA3472114_05121 | Not Available | Positive | 5189617 - 5190777 | 43129.9 |
| bifunctional chorismate mutase t and prephenate dehydrogenase | SAMEA3472114_05122 | Not Available | Negative | 5190820 - 5191941 | 42016.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





