Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472114_05060 | Not Available | Positive | 5151887 - 5152192 | 11928.2 |
| uncharacterised protein | SAMEA3472114_05061 | Not Available | Positive | 5152269 - 5152406 | 5560.64 |
| uncharacterised protein | SAMEA3472114_05062 | Not Available | Positive | 5152499 - 5152747 | 9422.63 |
| uncharacterized protein encoded in hypervariable junctions of pilus gene clusters | SAMEA3472114_05063 | Not Available | Positive | 5152744 - 5153091 | 13114.5 |
| uncharacterised protein | SAMEA3472114_05064 | Not Available | Positive | 5153554 - 5153955 | 15375.9 |
| nickase | SAMEA3472114_05065 | Not Available | Positive | 5153967 - 5155196 | 47369.8 |
| uncharacterised protein | SAMEA3472114_05066 | Not Available | Positive | 5155273 - 5155539 | 9833.19 |
| uncharacterised protein | SAMEA3472114_05067 | Not Available | Positive | 5155544 - 5155777 | 8701.37 |
| uncharacterised protein | SAMEA3472114_05068 | Not Available | Positive | 5155954 - 5156130 | 6880.57 |
| putative pilx1/virb1 protein, putative conjugal transfer protein, putative exported protein | SAMEA3472114_05069 | Not Available | Positive | 5156133 - 5156753 | 23116.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





