Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472114_05030 | Not Available | Negative | 5126667 - 5127269 | 23666.5 |
| putative phage-related regulatory protein | SAMEA3472114_05031 | Not Available | Negative | 5127363 - 5127569 | 7800.53 |
| malate transporter | SAMEA3472114_05032 | Not Available | Positive | 5129197 - 5129766 | 21748.9 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | SAMEA3472114_05033 | Not Available | Positive | 5129932 - 5130315 | 14895.4 |
| transposase | SAMEA3472114_05034 | Not Available | Negative | 5130329 - 5131525 | 43139.6 |
| putative pagc-like membrane protein | SAMEA3472114_05035 | Not Available | Positive | 5132088 - 5132645 | 20352.9 |
| hydrolase | SAMEA3472114_05036 | Not Available | Positive | 5133421 - 5134938 | 57375.3 |
| integrase | SAMEA3472114_05037 | Not Available | Negative | 5135122 - 5136384 | 47781.8 |
| plasmid stabilisation system protein | SAMEA3472114_05038 | Not Available | Negative | 5136848 - 5137174 | 12420.8 |
| cc2985 family addiction module antidote protein | SAMEA3472114_05039 | Not Available | Negative | 5137171 - 5137434 | 9779.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





