Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ribose transporter subunit rbsb | SAMEA3472114_04998 | Not Available | Negative | 5092270 - 5093160 | 30940.2 |
| high-affinity ribose transport system permease protein rbsc | SAMEA3472114_04999 | Not Available | Negative | 5093185 - 5094150 | 33454.0 |
| high affinity ribose transport atp-binding protein rbsa | SAMEA3472114_05000 | Not Available | Negative | 5094155 - 5095660 | 54957.0 |
| d-ribose high-affinity transporter | SAMEA3472114_05001 | Not Available | Negative | 5095668 - 5096087 | 15274.4 |
| kup system potassium uptake protein | SAMEA3472114_05002 | Not Available | Negative | 5096254 - 5098122 | 69298.3 |
| regulatory atpase rava | SAMEA3472114_05003 | Not Available | Positive | 5098345 - 5099841 | 56392.1 |
| protein viaa (vwa domain protein interacting with aaa atpase) | SAMEA3472114_05004 | Not Available | Positive | 5099835 - 5101286 | 55910.6 |
| aspartate--ammonia ligase (asparagine synthetase a) | SAMEA3472114_05005 | Not Available | Negative | 5101291 - 5102283 | 36679.7 |
| regulatory protein asnc | SAMEA3472114_05006 | Not Available | Positive | 5102435 - 5102893 | 16888.7 |
| flavoprotein | SAMEA3472114_05007 | Not Available | Positive | 5102983 - 5103426 | 15827.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





