Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thic | SAMEA3472114_04975 | Not Available | Negative | 5070911 - 5072806 | 70854.4 |
| regulator of sigma d | SAMEA3472114_04977 | Not Available | Negative | 5073039 - 5073515 | 18243.9 |
| nadh pyrophosphatase | SAMEA3472114_04978 | Not Available | Positive | 5073610 - 5074383 | 29690.6 |
| uroporphyrinogen decarboxylase | SAMEA3472114_04979 | Not Available | Positive | 5074423 - 5075487 | 39236.4 |
| endonuclease v | SAMEA3472114_04980 | Not Available | Positive | 5075497 - 5076168 | 24673.9 |
| protein of uncharacterised function (duf416) | SAMEA3472114_04981 | Not Available | Positive | 5076211 - 5076801 | 22613.9 |
| dna-binding protein hu-alpha | SAMEA3472114_04982 | Not Available | Positive | 5076988 - 5077260 | 9535.51 |
| membrane protein | SAMEA3472114_04983 | Not Available | Positive | 5077333 - 5077968 | 24031.1 |
| zinc resistance protein | SAMEA3472114_04984 | Not Available | Negative | 5077970 - 5078395 | 15200.3 |
| uncharacterised protein | SAMEA3472114_04985 | Not Available | Negative | 5078398 - 5078526 | 5024.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





