Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starvation sensing protein rspa | SAMEA3472114_04898 | Not Available | Positive | 4999081 - 5000295 | 45812.8 |
| transporter | SAMEA3472114_04899 | Not Available | Positive | 5000362 - 5001645 | 46345.1 |
| dna-binding transcriptional regulator oxyr | SAMEA3472114_04901 | Not Available | Positive | 5001897 - 5002814 | 34278.0 |
| soluble pyridine nucleotide transhydrogenase | SAMEA3472114_04902 | Not Available | Negative | 5002797 - 5004197 | 51563.4 |
| tetr-family transcriptional regulator | SAMEA3472114_04903 | Not Available | Positive | 5004474 - 5005178 | 26554.9 |
| inner membrane protein | SAMEA3472114_04904 | Not Available | Positive | 5005178 - 5005537 | 13024.3 |
| trna (uracil-5)-methyltransferase | SAMEA3472114_04905 | Not Available | Negative | 5005577 - 5006677 | 41969.3 |
| vitamin b12/cobalamin outer membrane transporter | SAMEA3472114_04907 | Not Available | Positive | 5007046 - 5008890 | 68393.7 |
| glutamate racemase | SAMEA3472114_04908 | Not Available | Positive | 5008835 - 5009692 | 31133.8 |
| tail fiber protein | SAMEA3472114_04909 | Not Available | Positive | 5010012 - 5013035 | 100639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





