Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein of incfii family | SAMEA3472114_04868 | Not Available | Positive | 4962947 - 4963804 | 32760.7 |
| copg-family putative dna binding protein | SAMEA3472114_04869 | Not Available | Positive | 4964720 - 4964998 | 10216.1 |
| rele/pare family plasmid stabilization system protein | SAMEA3472114_04870 | Not Available | Positive | 4964998 - 4965273 | 10750.1 |
| rhsb element core protein rshb | SAMEA3472114_04871 | Not Available | Positive | 4965805 - 4966725 | 34836.9 |
| uncharacterised protein | SAMEA3472114_04872 | Not Available | Positive | 4966727 - 4966963 | 8624.59 |
| rhs element protein | SAMEA3472114_04873 | Not Available | Positive | 4967016 - 4967294 | 10582.9 |
| insertion element protein | SAMEA3472114_04874 | Not Available | Negative | 4967539 - 4967811 | 10523.7 |
| peptidoglycan peptidase | SAMEA3472114_04875 | Not Available | Negative | 4967956 - 4968564 | 23138.9 |
| transcriptional repressor protein metj | SAMEA3472114_04876 | Not Available | Negative | 4968748 - 4969065 | 12141.4 |
| cystathionine gamma-synthase | SAMEA3472114_04877 | Not Available | Positive | 4969342 - 4970502 | 41582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





