Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | SAMEA3472114_04777 | Not Available | Positive | 4878686 - 4879336 | 24326.3 |
| yjhs protein | SAMEA3472114_04778 | Not Available | Negative | 4879344 - 4880324 | 36866.9 |
| n-acetylneuraminic acid mutarotase | SAMEA3472114_04779 | Not Available | Negative | 4880389 - 4881495 | 39604.2 |
| n-acetylneuraminic acid outer membrane porin | SAMEA3472114_04780 | Not Available | Negative | 4881515 - 4882231 | 27889.4 |
| uncharacterised protein | SAMEA3472114_04781 | Not Available | Negative | 4883030 - 4883425 | 14777.0 |
| tyrosine recombinase | SAMEA3472114_04782 | Not Available | Positive | 4883685 - 4884287 | 22994.8 |
| tyrosine recombinase | SAMEA3472114_04783 | Not Available | Positive | 4884764 - 4885360 | 23048.5 |
| type 1 fimbriae major subunit fima | SAMEA3472114_04784 | Not Available | Positive | 4885842 - 4886396 | 18609.9 |
| type-1 fimbrial protein fimi | SAMEA3472114_04785 | Not Available | Positive | 4886554 - 4887000 | 15932.0 |
| type i fimbrial chaperone | SAMEA3472114_04786 | Not Available | Positive | 4887037 - 4887762 | 26660.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





