Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein tral | SAMEA3472114_04756 | Not Available | Negative | 4865959 - 4866264 | 11976.8 |
| type iv conjugative transfer system pilin traa | SAMEA3472114_04757 | Not Available | Negative | 4866266 - 4866625 | 12865.2 |
| uncharacterised protein | SAMEA3472114_04758 | Not Available | Negative | 4866723 - 4866890 | 6269.87 |
| uncharacterised protein | SAMEA3472114_04759 | Not Available | Negative | 4867106 - 4867387 | 10962.5 |
| incf transfer protein tram | SAMEA3472114_04760 | Not Available | Negative | 4867867 - 4868253 | 14917.9 |
| putative transglycosylase | SAMEA3472114_04761 | Not Available | Positive | 4868723 - 4869229 | 18875.8 |
| yubp | SAMEA3472114_04762 | Not Available | Negative | 4869685 - 4870041 | 13611.2 |
| plasmid sos inhibition protein a | SAMEA3472114_04764 | Not Available | Negative | 4871096 - 4871815 | 27670.9 |
| plasmid sos inhibition protein b | SAMEA3472114_04765 | Not Available | Negative | 4871812 - 4872246 | 15831.7 |
| parb-like nuclease | SAMEA3472114_04766 | Not Available | Negative | 4872315 - 4874282 | 72523.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





