Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer nickase/helicase trai | SAMEA3472114_04736 | Not Available | Negative | 4839920 - 4845214 | 193441.0 |
| type iv conjugative transfer system coupling protein trad | SAMEA3472114_04737 | Not Available | Negative | 4845214 - 4847463 | 84480.4 |
| trat complement resistance protein | SAMEA3472114_04738 | Not Available | Negative | 4847605 - 4848342 | 26109.4 |
| uncharacterised protein | SAMEA3472114_04739 | Not Available | Negative | 4848510 - 4849085 | 21522.0 |
| conjugal transfer mating pair stabilization protein trag | SAMEA3472114_04740 | Not Available | Negative | 4849095 - 4851977 | 103927.0 |
| conjugal transfer pilus assembly protein trah | SAMEA3472114_04741 | Not Available | Negative | 4851979 - 4853340 | 49282.6 |
| conjugative transfer protein | SAMEA3472114_04742 | Not Available | Negative | 4853346 - 4853948 | 21723.2 |
| traf protein | SAMEA3472114_04743 | Not Available | Negative | 4853972 - 4854751 | 29649.1 |
| conjugative transfer protein | SAMEA3472114_04744 | Not Available | Negative | 4854748 - 4856586 | 66116.8 |
| conjugal transfer pilus assembly protein trbc | SAMEA3472114_04745 | Not Available | Negative | 4856583 - 4857197 | 22340.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





