Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intestinal colonization factor encoded by prophage cp-933o | SAMEA3472114_04725 | Not Available | Negative | 4832072 - 4832830 | 27760.8 |
| yacc | SAMEA3472114_04726 | Not Available | Negative | 4833232 - 4833507 | 10594.8 |
| yacb | SAMEA3472114_04727 | Not Available | Negative | 4833547 - 4833828 | 10894.2 |
| yaca | SAMEA3472114_04728 | Not Available | Negative | 4833825 - 4834094 | 10176.1 |
| replication initiation protein | SAMEA3472114_04729 | Not Available | Negative | 4835012 - 4836034 | 40067.3 |
| replication regulatory protein repa2 (protein copb) | SAMEA3472114_04731 | Not Available | Negative | 4836329 - 4836589 | 10038.3 |
| uncharacterised protein | SAMEA3472114_04732 | Not Available | Negative | 4837033 - 4838028 | 36841.1 |
| uncharacterised protein | SAMEA3472114_04733 | Not Available | Negative | 4838134 - 4838418 | 10559.5 |
| type-f conjugative transfer system pilin acetylase trax | SAMEA3472114_04734 | Not Available | Negative | 4838608 - 4839339 | 26729.7 |
| w0003 | SAMEA3472114_04735 | Not Available | Negative | 4839336 - 4839902 | 21538.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





