Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adenosylcobalamin biosynthesis protein | SAMEA3472114_04612 | Not Available | Positive | 4712538 - 4713083 | 20030.1 |
| cobalamin synthase | SAMEA3472114_04613 | Not Available | Positive | 4713080 - 4713823 | 26397.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3472114_04614 | Not Available | Positive | 4713835 - 4714914 | 36917.2 |
| erfk/ybis/ycfs/ynhg family protein | SAMEA3472114_04615 | Not Available | Positive | 4714976 - 4715911 | 34466.2 |
| Trna-asn | Not Available | Not Available | Positive | 4715967 - 4716042 | Not Available |
| nitrogen assimilation regulatory protein nac | SAMEA3472114_04617 | Not Available | Positive | 4716368 - 4717285 | 32803.9 |
| lysr family transcriptional regulator | SAMEA3472114_04618 | Not Available | Positive | 4717387 - 4718337 | 35898.1 |
| Trna-asn | Not Available | Not Available | Positive | 4718375 - 4718450 | Not Available |
| multidrug efflux system | SAMEA3472114_04620 | Not Available | Positive | 4718644 - 4720098 | 52802.1 |
| Trna-asn | Not Available | Not Available | Positive | 4720199 - 4720274 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





