Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shufflon-specific dna recombinase | SAMEA3472114_04485 | Not Available | Negative | 4591531 - 4592685 | 44255.7 |
| uncharacterised protein | SAMEA3472114_04486 | Not Available | Positive | 4592712 - 4592810 | 3407.34 |
| uncharacterised protein | SAMEA3472114_04487 | Not Available | Negative | 4593829 - 4593963 | 5101.62 |
| pre-pilin pilv | SAMEA3472114_04488 | Not Available | Negative | 4594451 - 4595743 | 45771.8 |
| inci1 conjugal transfer prepilin peptidase pilu | SAMEA3472114_04489 | Not Available | Negative | 4595743 - 4596399 | 24533.7 |
| lytic transglycosylase | SAMEA3472114_04490 | Not Available | Negative | 4596384 - 4596944 | 20746.4 |
| type iv prepilin pils | SAMEA3472114_04491 | Not Available | Negative | 4596954 - 4597568 | 21184.1 |
| pilr protein | SAMEA3472114_04492 | Not Available | Negative | 4597586 - 4598683 | 41418.5 |
| type ii secretion system protein e | SAMEA3472114_04493 | Not Available | Negative | 4598696 - 4600249 | 58246.3 |
| type iv pilus biogenesis protein pilp | SAMEA3472114_04494 | Not Available | Negative | 4600260 - 4600712 | 16066.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





