Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fimbrial usher protein fand | SAMEA3472114_04444 | Not Available | Negative | 4548370 - 4550784 | 88661.4 |
| putative fimbrial protein fanc | SAMEA3472114_04445 | Not Available | Negative | 4550877 - 4551392 | 17527.7 |
| transposase | SAMEA3472114_04446 | Not Available | Negative | 4552115 - 4553626 | 57278.3 |
| transposase | SAMEA3472114_04447 | Not Available | Negative | 4553657 - 4554007 | 13161.0 |
| transposase | SAMEA3472114_04448 | Not Available | Negative | 4554004 - 4554429 | 15936.0 |
| protein ydia | SAMEA3472114_04449 | Not Available | Positive | 4555083 - 4555796 | 26738.1 |
| putative mobilization protein mobc | SAMEA3472114_04450 | Not Available | Negative | 4556016 - 4556351 | 12432.7 |
| relaxosome component | SAMEA3472114_04451 | Not Available | Positive | 4556585 - 4556917 | 12614.3 |
| relaxase/mobilization nuclease domain-containing protein | SAMEA3472114_04452 | Not Available | Positive | 4556928 - 4559627 | 104003.0 |
| conjugal transfer protein, trbc | SAMEA3472114_04453 | Not Available | Negative | 4559664 - 4561955 | 86946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





