Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | SAMEA3472114_04381 | Not Available | Positive | 4475928 - 4477232 | 46067.9 |
| histidinol-phosphate aminotransferase | SAMEA3472114_04382 | Not Available | Positive | 4477229 - 4478299 | 39362.3 |
| imidazole glycerol-phosphate dehydratase/histidinol phosphatase | SAMEA3472114_04383 | Not Available | Positive | 4478299 - 4479366 | 40295.4 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472114_04384 | Not Available | Positive | 4479366 - 4479956 | 21654.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMEA3472114_04385 | Not Available | Positive | 4479956 - 4480693 | 26040.2 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472114_04386 | Not Available | Positive | 4480675 - 4481451 | 28442.0 |
| histidine biosynthesis bifunctional protein | SAMEA3472114_04387 | Not Available | Positive | 4481445 - 4482056 | 22856.2 |
| o-antigen chain length determinant wzz | SAMEA3472114_04388 | Not Available | Negative | 4482152 - 4483129 | 36265.7 |
| udp-glucose 6-dehydrogenase | SAMEA3472114_04389 | Not Available | Negative | 4483275 - 4484441 | 43713.4 |
| 6-phosphogluconate dehydrogenase | SAMEA3472114_04390 | Not Available | Negative | 4484691 - 4486097 | 51468.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





