Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uroporphyrinogen iii c-methyltransferase | SAMEA3472114_04316 | Not Available | Positive | 4417927 - 4419126 | 43444.9 |
| porphyrin biosynthetic protein | SAMEA3472114_04317 | Not Available | Positive | 4419129 - 4420325 | 45247.7 |
| arylsulfatase | SAMEA3472114_04320 | Not Available | Positive | 4421004 - 4421165 | 5572.62 |
| arylsulfatase | SAMEA3472114_04321 | Not Available | Negative | 4421249 - 4422484 | 46540.9 |
| Trna-pro | Not Available | Not Available | Positive | 4422631 - 4422707 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4422750 - 4422836 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 4422857 - 4422932 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4422991 - 4423067 | Not Available |
| amino acid permease | SAMEA3472114_04326 | Not Available | Negative | 4423170 - 4424555 | 50402.1 |
| udp-n-acetyl-d-mannosaminuronic acid transferase | SAMEA3472114_04327 | Not Available | Negative | 4424746 - 4425486 | 27963.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





