Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multifunctional fatty acid oxidation complex subunit alpha | SAMEA3472114_04276 | Not Available | Positive | 4376339 - 4378528 | 79544.4 |
| 3-ketoacyl-coa thiolase (fatty oxidation complex beta subunit) | SAMEA3472114_04277 | Not Available | Positive | 4378538 - 4379701 | 40866.7 |
| fmn reductase | SAMEA3472114_04278 | Not Available | Negative | 4379885 - 4380586 | 26243.5 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | SAMEA3472114_04279 | Not Available | Negative | 4380632 - 4382125 | 55606.8 |
| transcriptional activator | SAMEA3472114_04280 | Not Available | Positive | 4382292 - 4382780 | 18341.3 |
| putative deoxyribonuclease | SAMEA3472114_04281 | Not Available | Negative | 4382777 - 4383559 | 29028.6 |
| sec-independent protein translocase protein | SAMEA3472114_04282 | Not Available | Negative | 4383601 - 4384377 | 28877.9 |
| sec-independent translocase | SAMEA3472114_04283 | Not Available | Negative | 4384380 - 4384895 | 18421.8 |
| twin arginine translocase protein a | SAMEA3472114_04284 | Not Available | Negative | 4384899 - 4385168 | 9664.5 |
| ubiquinone biosynthesis protein | SAMEA3472114_04285 | Not Available | Negative | 4385247 - 4386887 | 63206.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





