Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472114_04246 | Not Available | Positive | 4343839 - 4345485 | 61543.5 |
| trna modification gtpase trme | SAMEA3472114_04247 | Not Available | Positive | 4345591 - 4346955 | 49233.8 |
| tryptophanase | SAMEA3472114_04248 | Not Available | Positive | 4347493 - 4348908 | 52776.4 |
| low affinity tryptophan permease | SAMEA3472114_04249 | Not Available | Positive | 4348999 - 4350246 | 45227.3 |
| multidrug resistance protein | SAMEA3472114_04250 | Not Available | Positive | 4350378 - 4351553 | 41492.2 |
| dna-binding transcriptional regulator yidz | SAMEA3472114_04251 | Not Available | Positive | 4351528 - 4352487 | 36875.8 |
| phosphopantetheinyl transferase | SAMEA3472114_04252 | Not Available | Positive | 4352644 - 4353393 | 27664.3 |
| putative nadph-dependent fmn reductase | SAMEA3472114_04253 | Not Available | Positive | 4353415 - 4353981 | 20404.9 |
| putative permease | SAMEA3472114_04254 | Not Available | Negative | 4354035 - 4355372 | 46847.8 |
| 6-phosphogluconate phosphatase | SAMEA3472114_04255 | Not Available | Positive | 4355539 - 4356204 | 24637.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





