Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acr | SAMEA3472114_04102 | Not Available | Positive | 4197945 - 4198262 | 11582.9 |
| putative cytoplasmic protein ybea | SAMEA3472114_04103 | Not Available | Positive | 4198266 - 4198733 | 17342.1 |
| penicillin-binding protein 2 | SAMEA3472114_04104 | Not Available | Positive | 4198764 - 4200665 | 70860.6 |
| rod shape-determining protein roda | SAMEA3472114_04105 | Not Available | Positive | 4200668 - 4201780 | 40478.6 |
| rare lipoprotein a | SAMEA3472114_04106 | Not Available | Positive | 4201791 - 4202879 | 37502.0 |
| d-alanyl-d-alanine carboxypeptidase | SAMEA3472114_04107 | Not Available | Positive | 4203019 - 4204230 | 44446.5 |
| protein ybed | SAMEA3472114_04108 | Not Available | Positive | 4204341 - 4204604 | 9827.92 |
| lipoate-protein ligase b | SAMEA3472114_04109 | Not Available | Positive | 4204705 - 4205346 | 23884.0 |
| lysr family transcriptional regulator | SAMEA3472114_04110 | Not Available | Positive | 4205605 - 4206558 | 35962.5 |
| lipoyl synthase lipa | SAMEA3472114_04111 | Not Available | Positive | 4206767 - 4207732 | 36073.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





