Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | SAMEA3472114_04092 | Not Available | Positive | 4187575 - 4188129 | 20955.0 |
| dnaj-class chaperone | SAMEA3472114_04093 | Not Available | Negative | 4188139 - 4189566 | 55196.3 |
| protein | SAMEA3472114_04094 | Not Available | Negative | 4189563 - 4190270 | 27737.5 |
| sel1 domain-containing protein | SAMEA3472114_04095 | Not Available | Positive | 4190434 - 4191411 | 37112.8 |
| putative alpha helical protein | SAMEA3472114_04096 | Not Available | Negative | 4191481 - 4191963 | 18798.2 |
| leucyl-trna synthetase | SAMEA3472114_04097 | Not Available | Positive | 4192198 - 4194780 | 97231.9 |
| rare lipoprotein b | SAMEA3472114_04098 | Not Available | Positive | 4194795 - 4195376 | 21357.8 |
| dna polymerase iii subunit delta | SAMEA3472114_04099 | Not Available | Positive | 4195376 - 4196407 | 38702.0 |
| nicotinic acid mononucleotide adenylyltransferase | SAMEA3472114_04100 | Not Available | Positive | 4196409 - 4197050 | 24605.4 |
| alpha-ribazole-5'-phosphate phosphatase | SAMEA3472114_04101 | Not Available | Positive | 4197074 - 4197685 | 23325.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





