Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | SAMEA3472114_04061 | Not Available | Negative | 4155984 - 4156310 | 12098.4 |
| outer membrane protein ybfm | SAMEA3472114_04062 | Not Available | Negative | 4156360 - 4157766 | 52758.8 |
| glutaminyl-trna synthetase | SAMEA3472114_04063 | Not Available | Negative | 4158346 - 4160010 | 63481.3 |
| n-acetylglucosamine-specific pts system eiicba components | SAMEA3472114_04064 | Not Available | Negative | 4160278 - 4162224 | 68346.9 |
| glucosamine-6-phosphate isomerase | SAMEA3472114_04065 | Not Available | Positive | 4162557 - 4163357 | 29775.9 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMEA3472114_04066 | Not Available | Positive | 4163417 - 4164565 | 40951.5 |
| n-acetylglucosamine repressor | SAMEA3472114_04067 | Not Available | Positive | 4164574 - 4165794 | 44544.0 |
| n-acetylglucosamine metabolism nagd protein | SAMEA3472114_04068 | Not Available | Positive | 4165842 - 4166594 | 27164.6 |
| asparagine synthetase b | SAMEA3472114_04069 | Not Available | Positive | 4166991 - 4168655 | 62676.4 |
| Trna-met | Not Available | Not Available | Positive | 4169034 - 4169110 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





