Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paral putative trna synthase | SAMEA3472114_04021 | Not Available | Positive | 4111693 - 4112955 | 44860.5 |
| aldolase | SAMEA3472114_04022 | Not Available | Positive | 4112952 - 4113590 | 23223.8 |
| hydroxypyruvate isomerase | SAMEA3472114_04023 | Not Available | Positive | 4113595 - 4114371 | 29293.6 |
| inner membrane permease ygbn | SAMEA3472114_04024 | Not Available | Positive | 4114460 - 4115824 | 46797.6 |
| rna polymerase sigma factor rpos | SAMEA3472114_04025 | Not Available | Negative | 4115918 - 4116910 | 37975.1 |
| lipoprotein nlpd | SAMEA3472114_04026 | Not Available | Negative | 4116973 - 4118112 | 40151.3 |
| protein-l-isoaspartate o-methyltransferase | SAMEA3472114_04027 | Not Available | Negative | 4118252 - 4118878 | 23259.2 |
| stationary phase survival protein sure | SAMEA3472114_04028 | Not Available | Negative | 4118872 - 4119633 | 26902.0 |
| trna pseudouridine synthase d | SAMEA3472114_04029 | Not Available | Negative | 4119614 - 4120663 | 39093.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMEA3472114_04030 | Not Available | Negative | 4120660 - 4121139 | 16898.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





